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Elser JJ, Acquisti C & Kumar S (2011) Stoichiogenomics: the evolutionary ecology of macromolecular elemental composition. Trends in Ecology & Evolution 26:38-44 PDF

Acquisti CA, Kumar S & Elser JJ (2009) Signatures of nitrogen limitation in the elemental composition of the proteins involved in the metabolic apparatus. Proceedings of the Royal Society of London Series B-Biological Sciences 276:2605-2610 PDF

Acquisti CA, Elser JJ & Kumar S (2009) Ecological nitrogen-limitation shapes the DNA composition of plant genomes. Molecular Biology and Evolution 26:953-956 PDF

Elser JJ, Fagan WF, Subramanian S & Kumar S (2006) Signatures of ecological resource availability in the animal and plant proteomes. Molecular Biology and Evolution 23:1946-1951 PDF

Genomics Resource Access for Stoichio-Proteomics

GRASP is a public resource for information on the frequencies of 20 amino acids and the atomic composition of their side chains. Currently, it includes information on the proteins of Drosophila melanogaster (fruit fly). In addition to sequence compositions, we have included information on the biological processes, molecular functions, pathways, and gene family for each protein. Access to these data is available through these broad categories as well as by using an exact protein accession identifier. Every query produces a set of proteins along with their amino acid or side-chain atomic compositions. All results can be saved in comma-delimited files for further analysis in other statistical tools. For additional information, please see the section on the Frequently Asked Questions (FAQs).

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Citing this resource:
Elser JJ, Acquisti C & Kumar S (2011) Stoichiogenomics: the evolutionary ecology of macromolecular elemental composition. Arizona State
University, Tempe, Arizona 85282.

Warning: Substantial duplication is not permitted. We encourage the wide use of this resource, but until it is complete it should not be used to represent a synthesis for any taxonomic group. Consult the authors if you have any questions about appropriate use, or if you plan to publish results from the database.

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